Protein Alignment Trf4 and Tbp

DIOPT Version :10

• Sequence 1: NP_608699.1
• Gene: Trf4 / 33452
• FlyBaseID: FBgn0031444
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_038712.3
• Gene: Tbp / 21374
• MGIID: 101838
• Length: 316
• Species: Mus musculus
• Alignment Length: 235
• Identity: 49/235 - (20%)
• Similarity: 88/235 - (37%)
• Gaps: 29/235 - (12%)

  Fly    57 EDLVTEPMKTESYLYKDYFN-KSPIDFPWEKAYEKGSSLGPDFYIDYENIFDNVANLAEIEEKLE 120
            :.|.|.|:...:.||..... .:||. |...|.| .|.:.|..    :||...|
Mouse   102 QTLTTAPLPGTTPLYPSPMTPMTPIT-PATPASE-SSGIVPQL----QNIVSTV----------- 149

  Fly   121 LHFRPFTCVMDFNCRFSMYELCLLLAESRFDPSSHPSVVVKITHPSAQVKIHAGGKISST-ALNA 184
                      :..|:..:..:.|....:.::|....:|:::|..|.....|.:.||:..| |.:.
Mouse   150 ----------NLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSE 204

  Fly   185 DSARSGLFKVIRILQDLDYKVDIMNFSKNIVNASFSMPFKIDLDLMSRRHVVEVAQNRSRRPFIT 249
            :.:|....|..|::|.|.:....::|....:..|..:.|.|.|:.:...|....:......|.:.
Mouse   205 EQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLI 269

  Fly   250 YTTENLGVRFAVFPTGFVLVLHSTSHCETREAIANFLPIL 289
            |......:...:|.:|.|::..:....|..||..|..|||
Mouse   270 YRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trf4	NP_608699.1	TBP_TLF	131..>234	CDD:447593	21/103 (20%)
		TBP	213..292	CDD:425630	17/77 (22%)
Tbp	NP_038712.3	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..21
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	104..135		10/32 (31%)
		PLN00062	139..315	CDD:177693	38/196 (19%)
		Repetitive region	142..218		17/100 (17%)
		Repetitive region	232..309		15/76 (20%)