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Protein Alignment Trf4 and tlf-1
DIOPT Version :9
Sequence 1: | NP_608699.1 |
Gene: | Trf4 / 33452 |
FlyBaseID: | FBgn0031444 |
Length: | 331 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001122474.1 |
Gene: | tlf-1 / 172676 |
WormBaseID: | WBGene00006577 |
Length: | 508 |
Species: | Caenorhabditis elegans |
Alignment Length: | 148 |
Identity: | 29/148 - (19%) |
Similarity: | 63/148 - (42%) |
Gaps: | 10/148 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 165 PSAQVKIHAGGKISSTALNAD-----SARSGLFKVIRILQDLDYKVDIMNFSKNIVNASFSMPFK 224
|...:|:::.||:......:: :|||....|.|::.....:|.|.|:..|.|.|:..:||.
Worm 311 PGCYIKVYSSGKVYIVGCRSEADCKRAARSIARHVQRVMGKTKERVSIRNYRVNNVLATCRLPFG 375
Fly 225 IDLDLMSRRHVVEVAQNRSRRPFITYTTENLGVRFAVFPTGFVLVLHSTSHCETREAIANFLPIL 289
|.::.::.::..|..........:.:.:........:..||.:.|..:.|..:..|.::...||:
Worm 376 IKIEEVAAKYPSESTYEPELSVGLVWRSVTPKATLRIHTTGSITVTGAQSEADVLEVLSKIYPIV 440
Fly 290 AKLK-----NGYPTAEEK 302
.:.: .|...|::|
Worm 441 LEFRCLERAKGNVAAQKK 458
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0.905639 |
Normalized mean entropy |
S205 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.860 |
|
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