DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and PRE2

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_015428.1 Gene:PRE2 / 856218 SGDID:S000006307 Length:287 Species:Saccharomyces cerevisiae


Alignment Length:193 Identity:42/193 - (21%)
Similarity:77/193 - (39%) Gaps:18/193 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTD-FISKNLHL 68
            |.|..:....:::|.|:..............|:..::.| ::.|:..|....||.: ::.....|
Yeast    77 TTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWETWLGSQCRL 140

  Fly    69 YKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQ-------VAMLLAGYDAVEGPDLHYIDSYGAA 126
            :::.....:|..:|:.         |.:|..||       :..::.||...|||.::|:||.|..
Yeast   141 HELREKERISVAAASK---------ILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTR 196

  Fly   127 QSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKG 189
            ...:....|.|..|...:|...:...||.|||..|.|:.:|....|...:..:..:|.|...|
Yeast   197 LKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNLYHVTEDG 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 42/193 (22%)
proteasome_beta_type_2 3..194 CDD:239727 42/193 (22%)
PRE2NP_015428.1 proteasome_beta_type_5 76..264 CDD:239730 42/193 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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