DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta4R2 and PRE10

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_015007.1 Gene:PRE10 / 854544 SGDID:S000005889 Length:288 Species:Saccharomyces cerevisiae


Alignment Length:235 Identity:49/235 - (20%)
Similarity:88/235 - (37%) Gaps:57/235 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTM-QAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHL 68
            |.:|||..|.|:.|.:.: .:|.||..|            |:...|.|......::..|....||
Yeast    36 TSIGIKCNDGVVFAVEKLITSKLLVPQK------------NVKIQVVDRHIGCVYSGLIPDGRHL 88

  Fly    69 YKISHGYHLSAKSAAHFTR--KT----------LADYIRTNTRYQ------VAMLLAGYDAVEGP 115
              ::.|    .:.||.|.:  ||          |..|::.:|.|.      |:.:..|.|. .|.
Yeast    89 --VNRG----REEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDK-NGA 146

  Fly   116 DLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLII----- 175
            .|:.::..|:......|..|.|.....:.|:     ||.......|..:..::...::|.     
Yeast   147 HLYMLEPSGSYWGYKGAATGKGRQSAKAELE-----KLVDHHPEGLSAREAVKQAAKIIYLAHED 206

  Fly   176 -NQRNFEVYV-----VDSKGMRKMEAINPGSLNKESISLS 209
             .:::||:.:     .::.|:.|..   .|.|.:|:|..:
Yeast   207 NKEKDFELEISWCSLSETNGLHKFV---KGDLLQEAIDFA 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 45/218 (21%)
proteasome_beta_type_2 3..194 CDD:239727 45/218 (21%)
PRE10NP_015007.1 proteasome_alpha_type_3 5..219 CDD:239720 43/206 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.