DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and PRE9

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_011651.3 Gene:PRE9 / 853036 SGDID:S000003367 Length:258 Species:Saccharomyces cerevisiae


Alignment Length:176 Identity:35/176 - (19%)
Similarity:71/176 - (40%) Gaps:30/176 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            |.:||...|.::||::.....:|:.......|:::|:|...:|..|...|    .:.:.....::
Yeast    34 TAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTAD----AEILINTARIH 94

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTR------YQVAMLLAGYDAVEGPDLHYIDSYG-AAQ 127
            ..::....:.........:.|:|..:..|:      :.|:.:.||||          |.|| ...
Yeast    95 AQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYD----------DRYGYQLY 149

  Fly   128 SINHAGH--GWGSMFCG-------SILQRYWNSKLSQEDAYSLMKK 164
            :.|.:|:  ||.::..|       ::||..:...:..:||..|..|
Yeast   150 TSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALK 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 35/176 (20%)
PRE9NP_011651.3 proteasome_alpha_type_4 4..216 CDD:239721 35/176 (20%)

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