DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and PAD2

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_201415.1 Gene:PAD2 / 836746 AraportID:AT5G66140 Length:250 Species:Arabidopsis thaliana


Alignment Length:225 Identity:52/225 - (23%)
Similarity:87/225 - (38%) Gaps:58/225 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AMETI------LGIKGPDFVMLASDTMQAKSLVFMKDDQS--KIHRLSDFNMMATVGDGGDTIQF 58
            |:|.:      :|::|.|.|:||   ::.||...::|.:|  ||..|.:...:|..|...|.   
plant    23 ALEAVRKGNAAVGVRGTDTVVLA---VEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADA--- 81

  Fly    59 TDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTN--TRY-----------------QVAM 104
            ...|:|              |:......|.||.|.:...  |||                 .::.
plant    82 RVLINK--------------ARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLST 132

  Fly   105 LLAGYDAVEG-PDLHYIDSYG--AAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCV 166
            |:.|:|.... |.|:..|..|  :|...|..|....|:  ...|::.:.....|| ...|..:.:
plant   133 LIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSI--REFLEKNYKESSGQE-TIKLAIRAL 194

  Fly   167 LEIQRRLIINQRNFEVYVV--DSKGMRKME 194
            ||:...   ..:|.||.|:  :..|:|::|
plant   195 LEVVES---GGKNIEVAVMTREETGLRQLE 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 50/222 (23%)
PAD2NP_201415.1 proteasome_alpha_type_7 4..210 CDD:239724 48/212 (23%)

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