DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and PAA1

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_198409.1 Gene:PAA1 / 833524 AraportID:AT5G35590 Length:246 Species:Arabidopsis thaliana


Alignment Length:174 Identity:35/174 - (20%)
Similarity:69/174 - (39%) Gaps:36/174 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRL---SDFNMMATVGDGGDTIQFTDFISKNL 66
            |.:|::|.|.|.:.:.......|:    |||.:..|   :.:..:...|...|............
plant    38 TSIGVRGKDSVCVVTQKKVPDKLL----DQSSVTHLFPITKYIGLVATGITADARSLVQQARNQA 98

  Fly    67 HLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQ-------VAMLLAGYDAVEGPDLHYIDSYG 124
            ..::.::||.:.....|    |.:||..:..|::.       |||:: |.|...||.|:..|.  
plant    99 AEFRFTYGYEMPVDILA----KWIADKSQVYTQHAYMRPLGVVAMVM-GVDEENGPLLYKCDP-- 156

  Fly   125 AAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLE 168
                   |||.:|        .:..::.:.:::|.:.::|.:.|
plant   157 -------AGHFYG--------HKATSAGMKEQEAVNFLEKKMKE 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 35/174 (20%)
PAA1NP_198409.1 proteasome_alpha_type_6 8..220 CDD:239723 35/174 (20%)

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