DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta4R2 and PBF1

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_191641.1 Gene:PBF1 / 825253 AraportID:AT3G60820 Length:223 Species:Arabidopsis thaliana


Alignment Length:202 Identity:48/202 - (23%)
Similarity:86/202 - (42%) Gaps:19/202 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHL- 68
            |.:.|.|.|:.::|:||..:.....:..|.||||:|:|..::::.|...| ::....:.|:.|| 
plant    17 TCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQAD-VKALQKVLKSRHLI 80

  Fly    69 YKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHY-IDSYGAAQSINHA 132
            |:..|...:|..:.|.....||  |.:....|....:|.|.|. ||....: .|:.|:.:.:.:.
plant    81 YQHQHNKQMSCPAMAQLLSNTL--YFKRFFPYYAFNVLGGLDE-EGKGCVFTYDAVGSYERVGYG 142

  Fly   133 GHGWGSMFCGSILQRYW-------------NSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYV 184
            ..|.||......|....             |:.||:.:|..|:|........|.|......|:.:
plant   143 AQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMI 207

  Fly   185 VDSKGMR 191
            :.:.|::
plant   208 LKADGIK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 48/202 (24%)
PBF1NP_191641.1 proteasome_beta_type_1 8..223 CDD:239726 48/202 (24%)

Return to query results.
Submit another query.