DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and PSMB10

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_002792.1 Gene:PSMB10 / 5699 HGNCID:9538 Length:273 Species:Homo sapiens


Alignment Length:166 Identity:37/166 - (22%)
Similarity:67/166 - (40%) Gaps:12/166 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            ||.|:...|.|:|.:||......|.......|||.::........|...|....|..::..:.|:
Human    41 TIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELH 105

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQ----VAMLLAGYDAVEGPDLHYIDSYGAAQSIN 130
            .:|.|......:.....|:||       .|||    .::::.|.| :.||.|:.:..:|:...:.
Human   106 ALSTGREPRVATVTRILRQTL-------FRYQGHVGASLIVGGVD-LTGPQLYGVHPHGSYSRLP 162

  Fly   131 HAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCV 166
            ....|.|.....::|:..:...::.|.|..|:.:.|
Human   163 FTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAV 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 37/166 (22%)
proteasome_beta_type_2 3..194 CDD:239727 37/166 (22%)
PSMB10NP_002792.1 proteasome_beta_type_7 40..227 CDD:239732 37/166 (22%)
Pr_beta_C 232..267 CDD:403609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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