DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and psma6b

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_001002589.1 Gene:psma6b / 436862 ZFINID:ZDB-GENE-040718-329 Length:246 Species:Danio rerio


Alignment Length:224 Identity:43/224 - (19%)
Similarity:78/224 - (34%) Gaps:37/224 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVG--------DGGDTIQFTDF 61
            |.:.::|.|..::.:.......|:    |.|.:..|  |.:...:|        |....:|...:
Zfish    38 TSVAVRGKDCAIVVTQKKVPDKLL----DSSTVTHL--FRITENIGCVMSGMTADSRSQVQRARY 96

  Fly    62 ISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTR------YQVAMLLAGYDAVEGPDLHYI 120
            .:.|   :|..:||.:......    |.:||..:..|:      ....|::.|.|...||.::..
Zfish    97 EAAN---WKYKYGYEIPVDMLC----KRIADISQVYTQNAEMRPLGCCMIVIGLDEELGPQVYKC 154

  Fly   121 DSYGAAQSINHAGHGWGSMFCGSILQRYWNSKL--SQEDAYSLMKKC---VLEIQRRLIINQRNF 180
            |..|..........|.......|.|::....||  :.|.|......|   ||.|.    ......
Zfish   155 DPAGYYCGFKATAAGVKQTEATSFLEKKVKKKLDWTFEQAVETAITCLTTVLSID----FKPSEL 215

  Fly   181 EVYVVDSKGMRKMEAINPGSLNKESISLS 209
            |:.|:.::. .|...::...::...:|||
Zfish   216 EIGVITAED-PKFRILSESEVDTHLVSLS 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 40/207 (19%)
proteasome_beta_type_2 3..194 CDD:239727 40/207 (19%)
psma6bNP_001002589.1 PRE1 7..245 CDD:223711 43/224 (19%)
proteasome_alpha_type_6 8..220 CDD:239723 38/198 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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