DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Prosalpha2

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster


Alignment Length:206 Identity:40/206 - (19%)
Similarity:90/206 - (43%) Gaps:26/206 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLS-DFNMMATVGDGGDTIQFTDFISKNLHLYK 70
            :||...:.|::|::......|.    :|..:||:. .:|.:..|..|    ...|:........|
  Fly    36 VGIIASNGVVIATENKHKSPLY----EQHSVHRVEMIYNHIGMVYSG----MGPDYRLLVKQARK 92

  Fly    71 ISHGYHLSAKSAAHFTR--KTLADYIRTNTR------YQVAMLLAGYDAVEGPDLHYIDSYGAAQ 127
            |:..|:|:.|.....::  :.:|..::..|:      :.|::|:.|:|. :.|.|:..|..||..
  Fly    93 IAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDN-DRPYLYQSDPSGAYF 156

  Fly   128 SINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRL--IINQRNFEVYVVDSKGM 190
            :......|..::...:.|::.::..|..:||   :...:|.::...  .:...|.|:.:.|..|.
  Fly   157 AWKATAMGKNAVNGKTFLEKRYSEDLELDDA---VHTAILTLKEGFEGKMTADNIEIGICDQNGF 218

  Fly   191 RKMEAINPGSL 201
            ::::   |.|:
  Fly   219 QRLD---PASI 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 38/197 (19%)
proteasome_beta_type_2 3..194 CDD:239727 38/197 (19%)
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 40/206 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441057
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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