DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Prosalpha4T2

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_001286844.1 Gene:Prosalpha4T2 / 37910 FlyBaseID:FBgn0017556 Length:252 Species:Drosophila melanogaster


Alignment Length:189 Identity:33/189 - (17%)
Similarity:77/189 - (40%) Gaps:15/189 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQ--SKIHRLSDFNMMATVGDGGDTIQFTDFISKNLH 67
            |::|::..:.:::.   ::.:|:..:::::  .||..|.|..:|...|...|    ...:.....
  Fly    33 TVMGLRTNNAIVIG---VEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTAD----ARILVSRAQ 90

  Fly    68 LYKISHGYHLSAKSAAHFTRKTLA----DYIRTNTR--YQVAMLLAGYDAVEGPDLHYIDSYGAA 126
            :...||..:....:...:..:.:|    :|.::|.|  :.::.|:.|:|....|.|...|..|..
  Fly    91 MEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQTDPSGIF 155

  Fly   127 QSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVV 185
            ........|..|......::::.:..|:..|..:.:|..|..:.....:|....||.|:
  Fly   156 YEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVSVSSLNHTQMEVAVL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 33/189 (17%)
proteasome_beta_type_2 3..194 CDD:239727 33/189 (17%)
Prosalpha4T2NP_001286844.1 arc_protsome_A 5..215 CDD:163366 33/189 (17%)
Ntn_hydrolase 5..214 CDD:294319 32/187 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441071
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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