DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Prosalpha5

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster


Alignment Length:190 Identity:44/190 - (23%)
Similarity:74/190 - (38%) Gaps:18/190 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            |.:||..|:.|:||.: .:..|.:.:.....||..:......||.|...|.....:........:
  Fly    36 TAIGICTPEGVVLAVE-KRITSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNH 99

  Fly    70 KISHGYHLSAKSAAHFTRKTLA---------DYIRTNTR-YQVAMLLAGYDAVEGPDLHYIDSYG 124
            ...:...:|.:|.|... .|||         |.....:| :.||:|.||.:|.: |.|.::|..|
  Fly   100 WFVYNERMSIESCAQAV-STLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQ-PQLWHMDPSG 162

  Fly   125 AAQSINHAGH--GWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEV 182
            .  .:.|...  |.||......||..:...|:.::|..:....:.::.... :|..|.||
  Fly   163 T--FVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEK-LNSTNVEV 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 44/190 (23%)
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 44/190 (23%)

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