DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Prosbeta4R1

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster


Alignment Length:205 Identity:90/205 - (43%)
Similarity:145/205 - (70%) Gaps:0/205 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 METILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLH 67
            ||||||:||.||::||||||:.||.:::.|:..|.||:||:.||:|.|||||.::|:|||.:|:.
  Fly     1 METILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMD 65

  Fly    68 LYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHA 132
            ||||::||.|:.:.|.||.|:.|:.|::::..:||::|:.|||...||:|||||..|.:..:.:.
  Fly    66 LYKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYG 130

  Fly   133 GHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEAIN 197
            |||....||..||:.::...:..:.||.::||||:|:.:|.:||.||.:::::...|:.||.:||
  Fly   131 GHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISKNGITKMNSIN 195

  Fly   198 PGSLNKESIS 207
            ..||..:.::
  Fly   196 LESLRGDILA 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 85/190 (45%)
proteasome_beta_type_2 3..194 CDD:239727 85/190 (45%)
Prosbeta4R1NP_608698.2 PRE1 1..204 CDD:223711 90/202 (45%)
proteasome_beta_type_2 1..193 CDD:239727 86/191 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449308
Domainoid 1 1.000 143 1.000 Domainoid score I1496
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 160 1.000 Inparanoid score I1634
Isobase 1 0.950 - 0 Normalized mean entropy S587
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1392180at2759
OrthoFinder 1 1.000 - - FOG0002770
OrthoInspector 1 1.000 - - mtm1116
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1860
1110.850

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