DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and psma4

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_999862.1 Gene:psma4 / 326687 ZFINID:ZDB-GENE-040426-1932 Length:261 Species:Danio rerio


Alignment Length:186 Identity:41/186 - (22%)
Similarity:71/186 - (38%) Gaps:37/186 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AME------TILGIKGPDFVMLASDTMQAKSL---VFMKDDQSKIHRLSDFNMMATVGDGGDTIQ 57
            |||      |.|||...|.|:||::......|   ||..:   ||::|::....:..|...|...
Zfish    24 AMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSE---KIYKLNEDMACSVAGITSDANV 85

  Fly    58 FTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTR------YQVAMLLAGYDAVEGPD 116
            .|:.:......|.:.:...:..:...    ..|.|..:..|:      :.|::|..|:|...|..
Zfish    86 LTNELRLIAQRYLLQYQEPIPCEQLV----TALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQ 146

  Fly   117 LHYIDSYGAAQSINHAGHGWGSMFCGS--------ILQRYWNSKLSQEDAYSLMKK 164
            |:..|..|     |:.  ||.:...|:        :.|.|...:::...|.:|..|
Zfish   147 LYQSDPSG-----NYG--GWKATCIGNNSAAAVSMLKQDYKEGEMTLSAALALAVK 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 40/185 (22%)
psma4NP_999862.1 proteasome_alpha_type_4 3..216 CDD:239721 41/186 (22%)

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