DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and psmb5

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_571226.1 Gene:psmb5 / 30387 ZFINID:ZDB-GENE-990415-215 Length:269 Species:Danio rerio


Alignment Length:196 Identity:38/196 - (19%)
Similarity:80/196 - (40%) Gaps:17/196 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            |.|..|....|::|.|:..............|:..::.:.:....|...|...:...:::...:|
Zfish    67 TTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIY 131

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQ-------VAMLLAGYDAVEGPDLHYIDSYGAAQ 127
            ::.:...:|..:|:    |.||:.:     ||       :..::.|:|. .||.|:|:||.|...
Zfish   132 ELRNKERISVAAAS----KLLANMV-----YQYKGMGLSMGTMVCGWDK-RGPGLYYVDSEGNRV 186

  Fly   128 SINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRK 192
            .......|.|||:...::.......|:.::|..|.::.:.:...|...:.....:|.|.|:|..:
Zfish   187 CGGLFAVGSGSMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEGWER 251

  Fly   193 M 193
            :
Zfish   252 V 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 38/196 (19%)
proteasome_beta_type_2 3..194 CDD:239727 38/196 (19%)
psmb5NP_571226.1 PTZ00488 44..268 CDD:185666 38/196 (19%)
proteasome_beta_type_5 66..253 CDD:239730 38/196 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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