DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Psmb2

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_036100.3 Gene:Psmb2 / 26445 MGIID:1347045 Length:201 Species:Mus musculus


Alignment Length:194 Identity:88/194 - (45%)
Similarity:132/194 - (68%) Gaps:0/194 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 METILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLH 67
            ||.::||:|||:|::|||.:.|.::|.||||..|:.::|:..::..||:.|||:||.::|.||:.
Mouse     1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQ 65

  Fly    68 LYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHA 132
            |||:.:||.||..:||:|||:.|||.:|:.|.|.|.:||||||..|||.|:|:|...|......|
Mouse    66 LYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFA 130

  Fly   133 GHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEAI 196
            .||:|:....|||.||:...:|:|.|..|::||:.|:|:|.|:|...|.|.|:|..|:..:|.|
Mouse   131 AHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDGIHNLENI 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 86/190 (45%)
Psmb2NP_036100.3 proteasome_beta_type_2 1..192 CDD:239727 86/190 (45%)

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