DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Psmb7

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_035317.1 Gene:Psmb7 / 19177 MGIID:107637 Length:277 Species:Mus musculus


Alignment Length:213 Identity:57/213 - (26%)
Similarity:94/213 - (44%) Gaps:24/213 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            ||.|:...|.::|.:||...:.:|....:.||||.:|........|...||...|..||.||.|:
Mouse    45 TIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELH 109

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQ----VAMLLAGYDAVEGPDLHYIDSYGAAQSIN 130
            .::.|......:|....::.|       .|||    .|::|.|.| |.||.|:.|..:|:...:.
Mouse   110 SLTTGRLPRVVTANRMLKQML-------FRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLP 166

  Fly   131 HAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQ----RNFEVYVVDSKGMR 191
            :...|.||:...::.:..:...:.:|:|    ||.|.|.....|.|.    .|.::.|:...   
Mouse   167 YVTMGSGSLAAMAVFEDKFRPDMEEEEA----KKLVSEAIAAGIFNDLGSGSNIDLCVISKS--- 224

  Fly   192 KMEAINPGSL-NKESISL 208
            |::.:.|.|: ||:...|
Mouse   225 KLDFLRPFSVPNKKGTRL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 52/196 (27%)
Psmb7NP_035317.1 proteasome_beta_type_7 44..232 CDD:239732 52/201 (26%)
Pr_beta_C 235..271 CDD:463597 3/8 (38%)

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