DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Psmb7

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_035317.1 Gene:Psmb7 / 19177 MGIID:107637 Length:277 Species:Mus musculus


Alignment Length:213 Identity:57/213 - (26%)
Similarity:94/213 - (44%) Gaps:24/213 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            ||.|:...|.::|.:||...:.:|....:.||||.:|........|...||...|..||.||.|:
Mouse    45 TIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELH 109

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQ----VAMLLAGYDAVEGPDLHYIDSYGAAQSIN 130
            .::.|......:|....::.|       .|||    .|::|.|.| |.||.|:.|..:|:...:.
Mouse   110 SLTTGRLPRVVTANRMLKQML-------FRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLP 166

  Fly   131 HAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQ----RNFEVYVVDSKGMR 191
            :...|.||:...::.:..:...:.:|:|    ||.|.|.....|.|.    .|.::.|:...   
Mouse   167 YVTMGSGSLAAMAVFEDKFRPDMEEEEA----KKLVSEAIAAGIFNDLGSGSNIDLCVISKS--- 224

  Fly   192 KMEAINPGSL-NKESISL 208
            |::.:.|.|: ||:...|
Mouse   225 KLDFLRPFSVPNKKGTRL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 52/196 (27%)
proteasome_beta_type_2 3..194 CDD:239727 52/196 (27%)
Psmb7NP_035317.1 PRE1 41..225 CDD:223711 51/194 (26%)
proteasome_beta_type_7 44..232 CDD:239732 52/201 (26%)
Pr_beta_C 236..271 CDD:289249 3/7 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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