DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Psmb5

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:212 Identity:44/212 - (20%)
Similarity:91/212 - (42%) Gaps:17/212 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            |.|..|....|::|:|:..............|:..::.:.:....|...|...:...:::...:|
Mouse    61 TTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIY 125

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQ-------VAMLLAGYDAVEGPDLHYIDSYGAAQ 127
            ::.:...:|..:|:    |.||:.:     ||       :..::.|:|. .||.|:|:||.|...
Mouse   126 ELRNKERISVAAAS----KLLANMV-----YQYKGMGLSMGTMICGWDK-RGPGLYYVDSEGNRI 180

  Fly   128 SINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRK 192
            |......|.||::...::.|.::..|..|:||.|.::.:.:...|...:.....:|.|...|..:
Mouse   181 SGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIR 245

  Fly   193 MEAINPGSLNKESISLS 209
            :.:.|...|:.:..|:|
Mouse   246 VSSDNVADLHDKYSSVS 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 40/195 (21%)
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 40/195 (21%)

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