DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Psmb10

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_038668.2 Gene:Psmb10 / 19171 MGIID:1096380 Length:273 Species:Mus musculus


Alignment Length:197 Identity:41/197 - (20%)
Similarity:79/197 - (40%) Gaps:12/197 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            ||.|:...|.|:|.:||......|.......|||.::........|...||...|...:..:.|:
Mouse    41 TIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELH 105

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQ----VAMLLAGYDAVEGPDLHYIDSYGAAQSIN 130
            .:|.|......:.....|:||       .|||    .::::.|.| :.||.|:.:..:|:...:.
Mouse   106 ALSTGREPRVATVTRILRQTL-------FRYQGHVGASLVVGGVD-LNGPQLYEVHPHGSYSRLP 162

  Fly   131 HAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEA 195
            ....|.|.....::|:..:...::.|.|..|:.:.:.......:.:..|.:..|:.:.|.:...|
Mouse   163 FTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGGNVDACVITAGGAKLQRA 227

  Fly   196 IN 197
            ::
Mouse   228 LS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 40/192 (21%)
proteasome_beta_type_2 3..194 CDD:239727 40/192 (21%)
Psmb10NP_038668.2 20S_bact_beta 39..238 CDD:163402 41/197 (21%)
proteasome_beta_type_7 40..226 CDD:239732 40/192 (21%)
Pr_beta_C 232..267 CDD:289249
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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