DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Psmb1

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_035315.1 Gene:Psmb1 / 19170 MGIID:104884 Length:240 Species:Mus musculus


Alignment Length:198 Identity:49/198 - (24%)
Similarity:81/198 - (40%) Gaps:13/198 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            |:|.|.|.||.::||||..::.......|..|.::|:|..::...|..||.:..|..|...|.:|
Mouse    38 TVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMY 102

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHY-IDSYGAAQSINHAG 133
            |.|:...::..:.|......|  |.|....|.|..::.|.|. ||....| .|..|:.|..:...
Mouse   103 KHSNNKAMTTGAIAAMLSTIL--YSRRFFPYYVYNIIGGLDE-EGKGAVYSFDPVGSYQRDSFKA 164

  Fly   134 HGWGSMFCGSIL---------QRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKG 189
            .|..|.....:|         |...:..|:.:.|..|:|...:....|.:.......:.:|..:|
Mouse   165 GGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEG 229

  Fly   190 MRK 192
            :|:
Mouse   230 IRE 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 49/198 (25%)
Psmb1NP_035315.1 proteasome_beta_type_1 29..240 CDD:239726 49/198 (25%)

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