DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and pas-7

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_496177.2 Gene:pas-7 / 174571 WormBaseID:WBGene00003928 Length:250 Species:Caenorhabditis elegans


Alignment Length:148 Identity:29/148 - (19%)
Similarity:57/148 - (38%) Gaps:40/148 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            |::.|:|.:.|::.:|.: ..|.::..:...::..::|...:|..|:..|     .|..||    
 Worm    36 TMIAIRGKNGVVVVADKL-ISSKLYTDNANPRMFNVNDNVGVAVAGNYPD-----GFALKN---- 90

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGH 134
             .::|..:          |.|.||........:|..:|.|       :| |.:.|.::..     
 Worm    91 -YAYGEAM----------KWLKDYREPMPIQNIANSVAEY-------IH-IHTLGISRPF----- 131

  Fly   135 GWGSMFCGSILQRYWNSK 152
            |.|:.|..      ||.:
 Worm   132 GAGAFFMS------WNKQ 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 29/148 (20%)
pas-7NP_496177.2 proteasome_alpha_type_3 5..216 CDD:239720 29/148 (20%)

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