DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and pbs-5

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_493558.1 Gene:pbs-5 / 173334 WormBaseID:WBGene00003951 Length:284 Species:Caenorhabditis elegans


Alignment Length:159 Identity:38/159 - (23%)
Similarity:71/159 - (44%) Gaps:5/159 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQF-TDFISKNLHLYKISHGYHLS 78
            :::|.|:..:...........||..:.| .|:||:..|....|| |..::|...||::.....::
 Worm    83 IIVAVDSRASSGEYISSKSVMKILDIGD-RMVATMAGGAADCQFWTRIVAKYCTLYELREKTSIT 146

  Fly    79 AKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGS 143
            ..:|:.:...||..|  ......|..::||||. :||.:..:||.|....:.....|.||:....
 Worm   147 VSAASKYFANTLYGY--RGQGLSVGSMVAGYDK-KGPQIFKVDSEGDRCQLKVCSVGSGSLNAYG 208

  Fly   144 ILQRYWNSKLSQEDAYSLMKKCVLEIQRR 172
            ||..::..|::.::|..|..:.::....|
 Worm   209 ILDNHYKPKMTDDEARKLGLRAIMHATYR 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 38/159 (24%)
proteasome_beta_type_2 3..194 CDD:239727 38/159 (24%)
pbs-5NP_493558.1 Ntn_hydrolase 65..252 CDD:320988 38/159 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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