DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and Psmb8

DIOPT Version :10

Sequence 1:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_034854.2 Gene:Psmb8 / 16913 MGIID:1346527 Length:276 Species:Mus musculus


Alignment Length:197 Identity:39/197 - (19%)
Similarity:79/197 - (40%) Gaps:3/197 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            |.|..|....|::|.|:.............:|:..::.:.:....|...|...:...::|...||
Mouse    74 TTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLY 138

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGH 134
            .:.:|..:|..:|:......:..|  ......:..::.|:|. :||.|:|:|..|...|......
Mouse   139 YLRNGERISVSAASKLLSNMMLQY--RGMGLSMGSMICGWDK-KGPGLYYVDDNGTRLSGQMFST 200

  Fly   135 GWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEAINPG 199
            |.|:.:...::...:...||.|:||.|.::.:.....|...:.....:|.:...|..|:|:.:..
Mouse   201 GSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVS 265

  Fly   200 SL 201
            .|
Mouse   266 DL 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 37/188 (20%)
Psmb8NP_034854.2 proteasome_beta_type_5 73..260 CDD:239730 37/188 (20%)

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