DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R2 and psmb11b

DIOPT Version :9

Sequence 1:NP_001259950.1 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_001268731.1 Gene:psmb11b / 100331481 ZFINID:ZDB-GENE-170530-2 Length:362 Species:Danio rerio


Alignment Length:233 Identity:52/233 - (22%)
Similarity:83/233 - (35%) Gaps:47/233 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69
            |.||......|:.|:||..:.:.........|:..:....:..|.|...|...:...:::.|.||
Zfish   111 TTLGFAFQGGVIAAADTRSSCAGKVACPASPKVLPIHSHLVGTTSGTSADCALWKRILARELRLY 175

  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYD------------------------ 110
            ::.|...||...||......|..:  ..|...||..|.|:|                        
Zfish   176 QLRHRRRLSTGGAAKLLSHMLHPF--KGTELCVAATLCGWDGDEDQDNEQPMTERYANTTLTSKS 238

  Fly   111 -----------AVEGPDLHYIDS-----YGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAY 159
                       .|.||.:.|:.|     .||..|:     |.||.:..|||.......:|.::|.
Zfish   239 SSQSAASSGLSGVRGPRVVYVCSDGLRLQGALFSV-----GSGSPYAYSILDGGVRWGMSAQEAA 298

  Fly   160 SLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEAIN 197
            ::.::.|.....|...:..|.::|.|.:||.|:.|..|
Zfish   299 AVAREAVYRATYRDAYSGNNVDLYHVTAKGWRRREREN 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R2NP_001259950.1 PRE1 1..194 CDD:223711 50/228 (22%)
proteasome_beta_type_2 3..194 CDD:239727 50/228 (22%)
psmb11bNP_001268731.1 proteasome_beta_type_5 110..333 CDD:239730 50/228 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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