DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or23a and Or88a

DIOPT Version :10

Sequence 1:NP_523458.3 Gene:Or23a / 33450 FlyBaseID:FBgn0026395 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster


Alignment Length:407 Identity:78/407 - (19%)
Similarity:147/407 - (36%) Gaps:97/407 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSETLKIDYFRVQLNAWRICGALDLSEGRYWSWSMLLCILVYLPTPMLLRGVYSFEDPVENNFSL 67
            ||..|.:.:|  ..|.|.|.       |.:|           |..|.      :...||     |
  Fly    51 LSAFLNVLFF--GCNGWDII-------GHFW-----------LGHPA------NQNPPV-----L 84

  Fly    68 SLTV-TSLSNLMKFCMYVAQLTKMVEV---------QSLIGQLDARVSGESQSERHRNMTEHLLR 122
            |:|: .|:..||   :|:.: .::||.         :.|:.|||.::     .|.:||..:. .|
  Fly    85 SITIYFSIRGLM---LYLKR-KEIVEFVNDLDRECPRDLVSQLDMQM-----DETYRNFWQR-YR 139

  Fly   123 MSKLFQITYAVVFIIAAVPFVFETELSLPMPM---------WFP-----------FDWK-NSMVA 166
            ..:::......:|.:..:.....|......|:         |.|           ..|. :.|..
  Fly   140 FIRIYSHLGGPMFCVVPLALFLLTHEGKDTPVAQHEQLLGGWLPCGVRKDPNFYLLVWSFDLMCT 204

  Fly   167 YIGALVFQEIGYVFQIMQCFAADSFPPLVLYL--ISEQCQLLILRIS-----EIGYGYKTLEENE 224
            ..|...|.....:|.:||       ..||::|  ::.|...:..|.|     ......:.|.:.:
  Fly   205 TCGVSFFVTFDNLFNVMQ-------GHLVMHLGHLARQFSAIDPRQSLTDEKRFFVDLRLLVQRQ 262

  Fly   225 QDLVNCIRDQNALYRLLDVTKSLVSYPMMVQFMVIGINIAITLFVLIFYVETLYDRIYYLCFLLG 289
            |.|....|..|.::::..:..:.|....:..::.:....:..|.:..:.:.||        .|:|
  Fly   263 QLLNGLCRKYNDIFKVAFLVSNFVGAGSLCFYLFMLSETSDVLIIAQYILPTL--------VLVG 319

  Fly   290 ITVQTYPLCYYGTMVQESFAELHYAVFCSNWVDQSASYRGHMLILAERTKRMQLLLAGNLVPIHL 354
            .   |:.:|..||.::::...|..::....|...|..||...|:..:..:|.|.|.|..|:.:::
  Fly   320 F---TFEICLRGTQLEKASEGLESSLRSQEWYLGSRRYRKFYLLWTQYCQRTQQLGAFGLIQVNM 381

  Fly   355 STYVACWKGAYSFFTLM 371
            ..:....:.||..||.:
  Fly   382 VHFTEIMQLAYRLFTFL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or23aNP_523458.3 7tm_6 59..365 CDD:251636 63/343 (18%)
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 64/355 (18%)

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