DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or23a and Orco

DIOPT Version :10

Sequence 1:NP_523458.3 Gene:Or23a / 33450 FlyBaseID:FBgn0026395 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster


Alignment Length:418 Identity:69/418 - (16%)
Similarity:131/418 - (31%) Gaps:129/418 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 TVTSL---SNLMKFCMYVA----------QLTKMVEVQSLIGQLDARVSGESQSERHRNMTEHLL 121
            |:|:|   ..:.|| :|:|          .:...|....|..:.|||....:           |.
  Fly    78 TITTLFFTHCITKF-IYLAVNQKNFYRTLNIWNQVNTHPLFAESDARYHSIA-----------LA 130

  Fly   122 RMSKLFQITY-----------AVVFIIAAVPFVFETELS---------LPMPMWFPFDWKNSMVA 166
            :|.|||.:..           .:.|...:|..|.:.|.:         ||:..::|::..:.|. 
  Fly   131 KMRKLFFLVMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMF- 194

  Fly   167 YIGALVFQEIGYVFQIMQCFAADSFPPLVLYLISEQCQLL--ILR-ISEIGYGYKTLEENEQDLV 228
            |:.:..||....:|.::.....|......|....||.|.|  |:: :.|:.....|...|...|.
  Fly   195 YMISFAFQIYYVLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALF 259

  Fly   229 NCI-----------------------------RDQNALYRLLDVTKS----------LVS----- 249
            ..:                             .|..|.:|.....:|          ||:     
  Fly   260 RSLSANSKSELIHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPN 324

  Fly   250 -----YPMMVQFMV----------------IGINIAITLFV----------LIFYVETLYDRIYY 283
                 ..|||:..:                ||......|.:          |:.|..|..:.:..
  Fly   325 GLTKKQEMMVRSAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKINGVNV 389

  Fly   284 LCF----LLGITV-QTYPLCYYGTMVQESFAELHYAVFCSNWVDQSASYRGHMLILAERTKRMQL 343
            ..|    .||..: |.:..|.:|..:.|..:.:..|.:..:|.|.|...:..:.|:.::.::...
  Fly   390 YAFTVVGYLGYALAQVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQKAMS 454

  Fly   344 LLAGNLVPIHLSTYVACWKGAYSFFTLM 371
            :.......:.|..:.:......::|.::
  Fly   455 ISGAKFFTVSLDLFASVLGAVVTYFMVL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or23aNP_523458.3 7tm_6 59..365 CDD:251636 68/410 (17%)
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 68/406 (17%)

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