DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or23a and Or30a

DIOPT Version :10

Sequence 1:NP_523458.3 Gene:Or23a / 33450 FlyBaseID:FBgn0026395 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_523520.2 Gene:Or30a / 34236 FlyBaseID:FBgn0032096 Length:377 Species:Drosophila melanogaster


Alignment Length:390 Identity:87/390 - (22%)
Similarity:165/390 - (42%) Gaps:58/390 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TLKIDYFRVQL--NAWRICGALDLSEGRYWSWSMLLCIL------VYLPTPML---LRGVY---S 56
            |||:..|...|  :.||          ||.:.:..:.|.      :||.|..|   :|.||   .
  Fly    17 TLKLMKFWSYLFVHNWR----------RYVAMTPYIIINCTQYVDIYLSTESLDFIIRNVYLAVL 71

  Fly    57 FEDPVENNFSLSLTVTSLS---NLMKFCMYVAQLTKMVEVQSLIGQLDARVSGESQSERHRNMTE 118
            |.:.|.....|.:...|..   |::| ..|:..|.....:.:::.:...|:|            .
  Fly    72 FTNTVVRGVLLCVQRFSYERFINILK-SFYIELLQSDDPIINILVKETTRLS------------V 123

  Fly   119 HLLRMSKLFQITYAVVFIIAAVPFVFETELSLPMPMWFPFDWKNSMVAYIGALVFQEIGYVFQ-I 182
            .:.|::.|......:.|:  ..| :|.:|..||..|:.|     ::..|..|..:.||.:|.| |
  Fly   124 LISRINLLMGCCTCIGFV--TYP-IFGSERVLPYGMYLP-----TIDEYKYASPYYEIFFVIQAI 180

  Fly   183 MQCFAADSFPPLVLYLIS-EQCQLLILRISEIGYGYKTLE--ENEQ---DLVNCIRDQNALYRLL 241
            |.......:.|....::: ....:|:.|:  :.:..::||  :|||   :::.||:.|..|...:
  Fly   181 MAPMGCCMYIPYTNMVVTFTLFAILMCRV--LQHKLRSLEKLKNEQVRGEIIWCIKYQLKLSGFV 243

  Fly   242 DVTKSLVSYPMMVQFMVIGINIAITLFVLIFYVETLYDRIYYLCFLLGITVQTYPLCYYGTMVQE 306
            |...:|.::..:|:|:..|..:.:.||.||. .:|:...:..:.:::.|...:..|.|....:..
  Fly   244 DSMNALNTHLHLVEFLCFGAMLCVLLFSLII-AQTIAQTVIVIAYMVMIFANSVVLYYVANELYF 307

  Fly   307 SFAELHYAVFCSNWVDQSASYRGHMLILAERTKRMQLLLAGNLVPIHLSTYVACWKGAYSFFTLM 371
            ...::..|.:.|||:|.....:..:..|..|:::...:|.|...|::|....:.....||||||:
  Fly   308 QSFDIAIAAYESNWMDFDVDTQKTLKFLIMRSQKPLAILVGGTYPMNLKMLQSLLNAIYSFFTLL 372

  Fly   372  371
              Fly   373  372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or23aNP_523458.3 7tm_6 59..365 CDD:251636 63/315 (20%)
Or30aNP_523520.2 7tm_6 58..366 CDD:251636 68/331 (21%)

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