DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or23a and Or19b

DIOPT Version :10

Sequence 1:NP_523458.3 Gene:Or23a / 33450 FlyBaseID:FBgn0026395 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster


Alignment Length:398 Identity:103/398 - (25%)
Similarity:168/398 - (42%) Gaps:58/398 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KIDYFRVQLNAWRICGALDLSE-------GRY-------WSWSMLLCILVYLPTPMLLRGVYSFE 58
            |:|..|..:|.|||...:.:..       ||:       |:.:..:||.|            ||.
  Fly     5 KVDSTRALVNHWRIFRIMGIHPPGKRTFWGRHYTAYSMVWNVTFHICIWV------------SFS 57

  Fly    59 DPVENNFSLSLTVTSLSNLMKFCMYVAQLT-------KMVEVQSLIGQLDARVSGESQSERHRNM 116
            ..:..:.||.....||...|...:|:.:|.       :|:....|:..||.|:.  ...||...|
  Fly    58 VNLLQSNSLETFCESLCVTMPHTLYMLKLINVRRMRGEMISSHWLLRLLDKRLG--CADERQIIM 120

  Fly   117 -----TEHLLRMSKLFQ-----ITYAVVFIIAAVPFVFETELSLPMPMWFPFDWKNSMVAYIGAL 171
                 .|.:.|  .:|:     :...:::|.|:      :|.:|..|.|.|::||:|..||:...
  Fly   121 AGIERAEFIFR--TIFRGLACTVVLGIIYISAS------SEPTLMYPTWIPWNWKDSTSAYLATA 177

  Fly   172 VFQEIGYVFQIMQCFAADSFPPLVLYLISEQCQLLILRISEIGYGYKTLEENEQD-LVNCIRDQN 235
            :......:..........|:|...|.|:|...:.|.||:|::|||........|. ||..|.|..
  Fly   178 MLHTTALMANATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLPAVRMQAILVGYIHDHQ 242

  Fly   236 ALYRLLDVTKSLVSYPMMVQFMVIG-INIAITLFVLIFYVETLYDRIYYLCFLLGI-TVQTYPLC 298
            .:.||....:..:|....:||.... ....|..|:|...|..:  |...:.|||.| |.:|..||
  Fly   243 IILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLLFGNVGIM--RFMNMLFLLVILTTETLLLC 305

  Fly   299 YYGTMVQESFAELHYAVFCSNWVDQSASYRGHMLILAERTKRMQLLLAGNLVPIHLSTYVACWKG 363
            |...:..:....|..||:..||:.||.::|..:|::..|.:...:|::|.:|||.:.|:....||
  Fly   306 YTAELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKG 370

  Fly   364 AYSFFTLM 371
            ||:..||:
  Fly   371 AYTMLTLL 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or23aNP_523458.3 7tm_6 59..365 CDD:251636 84/325 (26%)
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 84/318 (26%)

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