DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and PUP1

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_014800.3 Gene:PUP1 / 854328 SGDID:S000005683 Length:261 Species:Saccharomyces cerevisiae


Alignment Length:190 Identity:52/190 - (27%)
Similarity:80/190 - (42%) Gaps:32/190 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67
            ||:|||..:.:::|:||...:..:..|....|.||||.....:.||...|....:..|..|::|:
Yeast    31 TIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELH 95

  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRY--- 129
            .:....:..|..|:..:::||..|......:   |:|.|.|.| |..|..|...| |..|.|   
Yeast    96 SLYTSREPRVVSALQMLKQHLFKYQGHIGAY---LIVAGVDPT-GSHLFSIHAHG-STDVGYYLS 155

  Fly   130 --GGHGAAMNFCTPILEEFYKPDMDTQAAY----DVIKK--------------CVIELYK 169
              .|..|||    .:||..:|.|:..:.|.    |.|:.              ||:|:.|
Yeast   156 LGSGSLAAM----AVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 52/190 (27%)
PUP1NP_014800.3 proteasome_beta_type_7 30..219 CDD:239732 52/190 (27%)
Pr_beta_C 222..257 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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