DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta4R1 and psma6l

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_571870.2 Gene:psma6l / 83917 ZFINID:ZDB-GENE-010502-2 Length:252 Species:Danio rerio


Alignment Length:190 Identity:39/190 - (20%)
Similarity:66/190 - (34%) Gaps:63/190 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIIL-----ASDTMRNKSAMWLDDEVRKTHRISDYCMMS---------------TA 47
            |.:|::|.|..:|     .|||:.:.|.|  .:..|.|.||.  |:|:               .|
Zfish    38 TTVGIRGVDCAVLVTQKKVSDTLLDASTM--TNMFRITPRIG--CVMTGHYADSRSQVHRARIEA 98

  Fly    48 GDGGDCLKFSDFILRNMDLYKITNGYDLTVRGAVHFIRRHLSAYLKSD-------CTFQVSLLVG 105
            |:                 :|...|||:.|......:......|.::.       |...:|:   
Zfish    99 GE-----------------WKYKFGYDVPVDALCRRLADLSQVYTQNAEMRPLGCCMMLISM--- 143

  Fly   106 GYDLTSGPELHYIDYLG-------NSVPVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYD 158
              |...||.|:..|..|       .||.|:   |..|.::....:::..|...:.:..:|
Zfish   144 --DPQKGPMLYKCDPAGYFCGFRATSVGVK---HTEANSYLEKKIKKMQKKKEEVELDFD 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 39/190 (21%)
psma6lNP_571870.2 proteasome_alpha_type_6 8..226 CDD:239723 39/190 (21%)

Return to query results.
Submit another query.