DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and PAD2

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_201415.1 Gene:PAD2 / 836746 AraportID:AT5G66140 Length:250 Species:Arabidopsis thaliana


Alignment Length:213 Identity:49/213 - (23%)
Similarity:90/213 - (42%) Gaps:24/213 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LGVKGTDFIILASDTMRNKSAMWLDD--EVRKTHRISDYCMMSTAGDGGDCLKFSDFILRN---- 63
            :||:|||.::||   :..||...|.|  ..||...:.::..::.||     ||....:|.|    
plant    34 VGVRGTDTVVLA---VEKKSTPKLQDSRSARKIVSLDNHIALACAG-----LKADARVLINKARI 90

  Fly    64 -MDLYKITNGYDLTVRGAVHFIRRHLSAYLKSDCT--FQVSLLVGGYDLTSG-PELHYIDYLGNS 124
             ...:::|....:||.....:|......|.:|...  |.:|.|:.|:|..|. |.|:..|..|..
plant    91 ECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTF 155

  Fly   125 VPVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISK--NG 187
            ...:....|...|.....||:.||    ..:..:.||..:..|.:......:||::.::::  .|
plant   156 SAWKANATGRNSNSIREFLEKNYK----ESSGQETIKLAIRALLEVVESGGKNIEVAVMTREETG 216

  Fly   188 ITKMNSINLESLRGDILA 205
            :.::....::::...|.|
plant   217 LRQLEEAEIDAIVAKIEA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 47/199 (24%)
PAD2NP_201415.1 proteasome_alpha_type_7 4..210 CDD:239724 46/187 (25%)

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