DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta4R1 and PBF1

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_191641.1 Gene:PBF1 / 825253 AraportID:AT3G60820 Length:223 Species:Arabidopsis thaliana


Alignment Length:214 Identity:44/214 - (20%)
Similarity:88/214 - (41%) Gaps:21/214 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDL- 66
            |.:.:.|:|:.::|:||..:.....|..:..|.|:::|..::|::|...| :|....:|::..| 
plant    17 TCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQAD-VKALQKVLKSRHLI 80

  Fly    67 YKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYGG 131
            |:..:...::.......:...|  |.|....:....::||.|......:...|.:|:...|.||.
plant    81 YQHQHNKQMSCPAMAQLLSNTL--YFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSYERVGYGA 143

  Fly   132 HGAAMNFCTPILEEFYK-------PDMDTQA------AYDVIKKCVIELYKRFVINLRNIDLFLI 183
            .|:......|.|:...|       |..|:..      |.|::|.......:|.:.....:::.::
plant   144 QGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMIL 208

  Fly   184 SKNGITKMNSINLESLRGD 202
            ..:||    ...|..||.|
plant   209 KADGI----KTELMDLRKD 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 40/203 (20%)
PBF1NP_191641.1 proteasome_beta_type_1 8..223 CDD:239726 43/212 (20%)

Return to query results.
Submit another query.