DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and PAC1

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_188850.1 Gene:PAC1 / 821774 AraportID:AT3G22110 Length:250 Species:Arabidopsis thaliana


Alignment Length:228 Identity:45/228 - (19%)
Similarity:81/228 - (35%) Gaps:53/228 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METI------LGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGD------- 52
            ||.|      :|:...|.::|..:.......:.......|.::|.|:...:.||...|       
plant    25 MEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINT 89

  Fly    53 ----CLKFSDFILRNMDLYKITNGYDLTVRGAVHF--IRRHLSAYLKSDCTFQVSLLVGGYDLTS 111
                ..:::......|.:.::......|.:|...|  :|           .|.||.|..|:|...
plant    90 ARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLR-----------PFGVSFLFAGWDKHH 143

  Fly   112 GPELHYIDYLGNSVPVRYGGH-----GAAMNFCTPILEEFYKPDMDTQAAYDVIKKCV------- 164
            |.:|:..|..||     |||.     ||.......||::.||.|...:.|.::..|.:       
plant   144 GFQLYMSDPSGN-----YGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVLTKTMDST 203

  Fly   165 ------IELYKRFVINLRNIDLFLISKNGITKM 191
                  :||.:.::...:.:...:.|...:||:
plant   204 SLTSEKLELAEVYLTPSKTVKYHVHSPESLTKL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 45/228 (20%)
PAC1NP_188850.1 proteasome_alpha_type_4 3..215 CDD:239721 42/205 (20%)

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