DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and psmb13a

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_571752.2 Gene:psmb13a / 64280 ZFINID:ZDB-GENE-001208-2 Length:281 Species:Danio rerio


Alignment Length:193 Identity:54/193 - (27%)
Similarity:87/193 - (45%) Gaps:18/193 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67
            ||.||...|.::|.:||......:..|....|.|.|:.......||...|..|.:|.:..|:.::
Zfish    46 TIAGVVFKDGVVLGADTRATSDEVVADKMCAKIHYIAPNIYCCGAGTAADTEKTTDMLSSNLTIF 110

  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRY--- 129
            .:.:|.:..|..||:.|:..|..|   ......:|::||.|.| |..|:.:...|:...|.|   
Zfish   111 SMNSGRNPRVVMAVNIIQDMLFRY---HGMIGANLILGGVDCT-GSHLYTVGPYGSMDKVPYLAM 171

  Fly   130 -GGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINL---RNIDLFLISKNGI 188
             .|..|||.    |||:.:|.:||.:.|..::...:   ....:.:|   .||||.:|:|.|:
Zfish   172 GSGDLAAMG----ILEDRFKVNMDLEQAKALVSDAI---QAGIMCDLGSGNNIDLCVITKEGV 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 54/193 (28%)
psmb13aNP_571752.2 proteasome_beta_type_7 45..233 CDD:239732 54/193 (28%)
Pr_beta_C 241..272 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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