DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and PSMB1

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens


Alignment Length:213 Identity:55/213 - (25%)
Similarity:92/213 - (43%) Gaps:23/213 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67
            |||.:.|.||.|:||||..::.......:..|.::::|..::..:|..||||..:..|...:.:|
Human    39 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMY 103

  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDCTF--QVSLLVGGYDLTSGPELHYIDYLGNSVPVRYG 130
            |.:|...:|. ||   |...||..|.|...|  .|..::||.|......::..|.:|:.....:.
Human   104 KHSNNKAMTT-GA---IAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFK 164

  Fly   131 GHGAAMNFCTPILE-----------EFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLIS 184
            ..|:|.....|:|:           |.....:|  .|..::|...|...:|.|.....:.:.:::
Human   165 AGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLD--RAMRLVKDVFISAAERDVYTGDALRICIVT 227

  Fly   185 KNGITKMNSINLESLRGD 202
            |.||.:    ...|||.|
Human   228 KEGIRE----ETVSLRKD 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 51/202 (25%)
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 54/211 (26%)

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