DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta4R1 and PSMA6

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_002782.1 Gene:PSMA6 / 5687 HGNCID:9535 Length:246 Species:Homo sapiens


Alignment Length:168 Identity:34/168 - (20%)
Similarity:56/168 - (33%) Gaps:48/168 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 YRSDILDSMRMAPSQRSQRFHISNILELNNQQHQHQDQPATKDQPSVASLSSSTLESQQHATQPS 113
            :|.||:|:.:....:..::.|:..:|: ..:.||..|:....|.   ::....|:.|:..|.:..
Human    11 HRFDIIDTFKTLTKELLRQEHLPKVLQ-KKEPHQLTDRTFFIDG---SNQGLKTIPSEILALKEL 71

  Fly   114 LDVTAPTSYPDDQSAALPYGTMSSQTASCLPLQ--------PVL-------------NPSAIG-- 155
            .:|    ...::|.|.:|.|....|....|.|.        |.|             ||..|.  
Human    72 EEV----HLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGALSSLESLDLSGNPLVISSL 132

  Fly   156 ----------------TGIPYDPPPYYSYSHHAHHLFG 177
                            ||:...|.......||. .|||
Human   133 HVVSRLRTLRELRLYRTGLTEIPTGICKSLHHL-ELFG 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 34/168 (20%)
PSMA6NP_002782.1 proteasome_alpha_type_6 8..220 CDD:239723 34/168 (20%)

Return to query results.
Submit another query.