DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and psmb2

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001002609.1 Gene:psmb2 / 436882 ZFINID:ZDB-GENE-040718-353 Length:199 Species:Danio rerio


Alignment Length:194 Identity:70/194 - (36%)
Similarity:123/194 - (63%) Gaps:0/194 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMD 65
            ||.::|::|.||:::|:|.:...|.:.:..:..|..::|:..::...|:.||.::|:::|.:|:.
Zfish     1 MEYLIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQ 65

  Fly    66 LYKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYG 130
            |||:.|||:|:...|.:|.|::|:.||:|...:.|:||:.|||.|.||.|:|:|||.......:.
Zfish    66 LYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSALAKAPFA 130

  Fly   131 GHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISKNGITKMNSI 194
            .||........||:.:|:||:..:.|.|::|||:.||.|||::||.:..:.||.|:||..|..:
Zfish   131 AHGYGAFLTLSILDRYYRPDLTREEAVDLLKKCLEELNKRFILNLPSFTVRLIDKDGIHDMEKL 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 70/191 (37%)
psmb2NP_001002609.1 proteasome_beta_type_2 1..192 CDD:239727 69/190 (36%)

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