DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and Prosalpha7

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster


Alignment Length:171 Identity:39/171 - (22%)
Similarity:75/171 - (43%) Gaps:8/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67
            |::|::|.|.::||.:.:.. |.::..|...:...|.....|:.||...|....:|...:....|
  Fly    36 TVIGIRGKDAVVLAVEKIIT-SKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANY 99

  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDCT--FQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYG 130
            :......:.::...|.:..::.||......  |.:|:::..:|...||:|:.|:..|:|......
  Fly   100 RQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLYKIEPSGSSFGYFAC 164

  Fly   131 GHGAAMNFCTPILEEFYKPDMDT----QAAYDVIKKCVIEL 167
            ..|.|.......:|:. |.||.|    ::|.::|.|...||
  Fly   165 ASGKAKQLAKTEMEKL-KMDMRTDELVESAGEIIYKVHDEL 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 39/171 (23%)
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 39/171 (23%)

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