DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and Prosalpha6T

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster


Alignment Length:164 Identity:41/164 - (25%)
Similarity:66/164 - (40%) Gaps:16/164 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METI------LGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDF 59
            ||.:      :|:||||:.:||:....:|....|.   ||...:.|:..||.||...|......:
  Fly    26 MEAVKQGAATVGLKGTDYAVLAALCRTSKDTNTLQ---RKIMPVDDHVGMSIAGLTADARVVCQY 87

  Fly    60 ILRNMDLYKITNGYDLTVRGAVHFIRRHLSAYLK--SDCTFQVSLLVGGYDLTSGPELHYIDYLG 122
            :......|:.:...:..||..|..:...|....:  ....:.|.|||.||| ..||.::.:....
  Fly    88 MRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVGLLVAGYD-EQGPHIYQVMPTA 151

  Fly   123 NSVPVRYGGHG----AAMNFCTPILEEFYKPDMD 152
            |.:..:....|    :|..:....:|.|...|||
  Fly   152 NVLNCKAMAIGSRSQSARTYLERNMESFEDCDMD 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 41/164 (25%)
Prosalpha6TNP_609623.1 proteasome_alpha_type_1 6..215 CDD:239718 41/164 (25%)

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