DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and psmb5

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_571226.1 Gene:psmb5 / 30387 ZFINID:ZDB-GENE-990415-215 Length:269 Species:Danio rerio


Alignment Length:185 Identity:39/185 - (21%)
Similarity:77/185 - (41%) Gaps:3/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67
            |.|..|....:|:|.|:.....|......|:|...|:.|.:.:.||...||..:...:.|...:|
Zfish    67 TTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIY 131

  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYGGH 132
            ::.|...::|..|...:...:..|  ......:..:|.|:| ..||.|:|:|..||.|.......
Zfish   132 ELRNKERISVAAASKLLANMVYQY--KGMGLSMGTMVCGWD-KRGPGLYYVDSEGNRVCGGLFAV 193

  Fly   133 GAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISKNG 187
            |:...:...:::...:.|:....|.|:.::.:.:...|...:...::|:.:...|
Zfish   194 GSGSMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNLYRVHSEG 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 39/185 (21%)
psmb5NP_571226.1 proteasome_beta_type_5 66..253 CDD:239730 39/185 (21%)

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