DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and Psmb2

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_058980.1 Gene:Psmb2 / 29675 RGDID:61874 Length:201 Species:Rattus norvegicus


Alignment Length:194 Identity:65/194 - (33%)
Similarity:120/194 - (61%) Gaps:0/194 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMD 65
            ||.::|::|.|::::|||.:...:.:.:.|:..|..::|:..::...|:.||.::|:::|.:|:.
  Rat     1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQ 65

  Fly    66 LYKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYG 130
            |||:.|||:|:...|.:|.||:|:..|:|...:.|:||:.|||...||.|:|:|||.......:.
  Rat    66 LYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFA 130

  Fly   131 GHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISKNGITKMNSI 194
            .||........||:.:|.|.:..:.|.::::||:.||.|||::||....:.:|.|:||..:.:|
  Rat   131 AHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDGIHNLENI 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 64/191 (34%)
Psmb2NP_058980.1 proteasome_beta_type_2 1..192 CDD:239727 64/190 (34%)

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