DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and Psma5

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_063137749.1 Gene:Psma5 / 29672 RGDID:61848 Length:249 Species:Rattus norvegicus


Alignment Length:207 Identity:44/207 - (21%)
Similarity:73/207 - (35%) Gaps:34/207 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67
            |.:|::.::.:.||.: .|..|.:.....:.|...|..:...:.:|...|.....|........:
  Rat    36 TAIGIQTSEGVCLAVE-KRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNH 99

  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDC-------TFQVSLLVGGYDLTSGPELHYIDYLGNSV 125
            ..|....:||......:......:.:.|.       .|.|:||.||.| ..||:|.::|..|..|
  Rat   100 WFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVD-EKGPQLFHMDPSGTFV 163

  Fly   126 PVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYD---VIKKCVIELYKRFVINLRNIDLFLISKNG 187
            .......|:|.......|:|.|...|..:.|..   :|.|.|:|                     
  Rat   164 QCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVME--------------------- 207

  Fly   188 ITKMNSINLESL 199
             .|:|:.|:|.|
  Rat   208 -EKLNATNIEVL 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 40/199 (20%)
Psma5XP_063137749.1 None

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