DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and Psma1

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_058974.1 Gene:Psma1 / 29668 RGDID:61841 Length:263 Species:Rattus norvegicus


Alignment Length:99 Identity:19/99 - (19%)
Similarity:42/99 - (42%) Gaps:18/99 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 FQVSLLVGGYD------LTSGPELHYIDYLGNSVPVRYGGHGAAMNFCTPILEEFYKPDMDTQAA 156
            :.|.||:.|||      ..:.|..:|.|....|:..|   ..:|..:....:.||.:.::|    
  Rat   128 YGVGLLIAGYDDMGPHVFQTCPSANYFDCRAMSIGAR---SQSARTYLERHMSEFMQCNLD---- 185

  Fly   157 YDVIKKCVIELYKRFV----INLRNIDLFLISKN 186
             :::|..:..|.:...    :..:|:.:.::.|:
  Rat   186 -ELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 19/99 (19%)
Psma1NP_058974.1 proteasome_alpha_type_1 6..216 CDD:239718 18/95 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263
Blue background indicates that the domain is not in the aligned region.

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