DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and Psmb2

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_036100.3 Gene:Psmb2 / 26445 MGIID:1347045 Length:201 Species:Mus musculus


Alignment Length:209 Identity:71/209 - (33%)
Similarity:126/209 - (60%) Gaps:10/209 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMD 65
            ||.::|::|.|::::|||.:...:.:.:.|:..|..::|:..::...|:.||.::|:::|.:|:.
Mouse     1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQ 65

  Fly    66 LYKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYG 130
            |||:.|||:|:...|.:|.||:|:..|:|...:.|:||:.|||...||.|:|:|||.......:.
Mouse    66 LYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFA 130

  Fly   131 GHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISKNGITKMNSIN 195
            .||........||:.:|.|.:..:.|.::::||:.||.|||::||....:.:|.|:||.     |
Mouse   131 AHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDGIH-----N 190

  Fly   196 LESLRGDILAGPKR 209
            ||:     :|.|||
Mouse   191 LEN-----IAFPKR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 64/191 (34%)
Psmb2NP_036100.3 proteasome_beta_type_2 1..192 CDD:239727 65/195 (33%)

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