DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and Psma6

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_036098.1 Gene:Psma6 / 26443 MGIID:1347006 Length:246 Species:Mus musculus


Alignment Length:161 Identity:33/161 - (20%)
Similarity:61/161 - (37%) Gaps:21/161 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTH--RISDY--CMMS-TAGDGGDCLKFSDFILR 62
            |.:.|:|.|..::.:   :.|....|.|....||  :|::.  |:|: ...|....::.:.:...
Mouse    38 TSVAVRGKDCAVIVT---QKKVPDKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAA 99

  Fly    63 NMDLYKITNGYDLTVRGAVHFIRRHLSAYLKS------DCTFQVSLLVGGYDLTSGPELHYIDYL 121
            |   :|...||::.|......|......|.::      .|    .:::.|.|...||:::..|..
Mouse   100 N---WKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGC----CMILIGIDEEQGPQVYKCDPA 157

  Fly   122 GNSVPVRYGGHGAAMNFCTPILEEFYKPDMD 152
            |.....:....|......|..||:..|...|
Mouse   158 GYYCGFKATAAGVKQTESTSFLEKKVKKKFD 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 33/161 (20%)
Psma6NP_036098.1 proteasome_alpha_type_6 8..220 CDD:239723 33/161 (20%)

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