DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta4R1 and Psmb5

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:197 Identity:42/197 - (21%)
Similarity:89/197 - (45%) Gaps:3/197 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67
            |.|..|....:|:|:|:.....|......|:|...|:.|.:.:.||...||..:...:.|...:|
Mouse    61 TTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIY 125

  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYGGH 132
            ::.|...::|..|...:...:..|  ......:..::.|:| ..||.|:|:|..||.:.......
Mouse   126 ELRNKERISVAAASKLLANMVYQY--KGMGLSMGTMICGWD-KRGPGLYYVDSEGNRISGTAFSV 187

  Fly   133 GAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISKNGITKMNSINLE 197
            |:...:...:::..|..|:..:.|||:.::.:.:...|...:...::|:.:.::|..:::|.|:.
Mouse   188 GSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVA 252

  Fly   198 SL 199
            .|
Mouse   253 DL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 39/189 (21%)
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 39/188 (21%)

Return to query results.
Submit another query.