DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and Psmb10

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_038668.2 Gene:Psmb10 / 19171 MGIID:1096380 Length:273 Species:Mus musculus


Alignment Length:185 Identity:44/185 - (23%)
Similarity:83/185 - (44%) Gaps:4/185 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67
            ||.|:...|.:||.:||.....::..|....|.|.|:.......||...|....:......|:|:
Mouse    41 TIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELH 105

  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYGGH 132
            .::.|.:..|......:|:.|..|   ......||:|||.|| :||:|:.:...|:...:.:...
Mouse   106 ALSTGREPRVATVTRILRQTLFRY---QGHVGASLVVGGVDL-NGPQLYEVHPHGSYSRLPFTAL 166

  Fly   133 GAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNIDLFLISKNG 187
            |:.......:||:.::|:|..:||.:::.:.:.......:.:..|:|..:|:..|
Mouse   167 GSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGGNVDACVITAGG 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 44/185 (24%)
Psmb10NP_038668.2 proteasome_beta_type_7 40..226 CDD:239732 44/185 (24%)
Pr_beta_C 231..267 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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