DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4R1 and Psma3

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_035314.3 Gene:Psma3 / 19167 MGIID:104883 Length:255 Species:Mus musculus


Alignment Length:184 Identity:37/184 - (20%)
Similarity:72/184 - (39%) Gaps:16/184 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMDLY 67
            |.:|::..|.::...:.: ..|.::.:...::...:..:..|:.||...|....:|........:
Mouse    36 TAIGIRCKDGVVFGVEKL-VLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNF 99

  Fly    68 KITNGYDLTVRGAVHFIRRHLSAYLKSDCT--FQVSLLVGGYDLTSGPELHYIDYLGNSVPVRYG 130
            :...||::.::.....:..::.||......  |..|.::|.|....|.:|:.||..|    |.||
Mouse   100 RSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSG----VSYG 160

  Fly   131 GHGAAMNFCTPILE-EFYKPDMDTQAAYDVIKKCVIELY--------KRFVINL 175
            ..|.|:.......: |..|..|......||:|:....:|        |.|.:.|
Mouse   161 YWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELEL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 37/184 (20%)
Psma3NP_035314.3 proteasome_alpha_type_3 5..217 CDD:239720 37/184 (20%)

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