DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta4R1 and PSMA8

DIOPT Version :10

Sequence 1:NP_608698.2 Gene:Prosbeta4R1 / 33449 FlyBaseID:FBgn0031442 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_653263.2 Gene:PSMA8 / 143471 HGNCID:22985 Length:256 Species:Homo sapiens


Alignment Length:212 Identity:56/212 - (26%)
Similarity:86/212 - (40%) Gaps:36/212 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILGVKGTDFIILASDTMRNKSAMWLDDE--VRKTHRISDYCMMSTAGDGGDCLKFSDFILRNMD 65
            |.:|::||:.::|.   :..||...|.||  |||...:.|:..|:.|       ..:.||....|
Human    33 TAVGIRGTNIVVLG---VEKKSVAKLQDERTVRKICALDDHVCMAFA-------VLTIFIGLTAD 87

  Fly    66 LYKITN-------GYDLTVRG--AVHFIRRHLSAYLKSDCT-------FQVSLLVGGYDLTSGPE 114
            ...:.|       .:.|||..  .|.:|.|.: |.||...|       |.:|.|:.|:|......
Human    88 ARVVINRARVECQSHKLTVEDPVTVEYITRFI-ATLKQKYTQSNGRRPFGISALIVGFDDDGISR 151

  Fly   115 LHYIDYLGNSVPVRYGGHGAAMNFCTPILEEFYKPD---MDTQAAYDVIKKCVIELYKRFVINLR 176
            |:..|..|.....:....|.:.......||:.|..|   .|::|    ||..:..|.:......:
Human   152 LYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEA----IKLAIKALLEVVQSGGK 212

  Fly   177 NIDLFLISKNGITKMNS 193
            ||:|.:|.:|...||.|
Human   213 NIELAIIRRNQPLKMFS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4R1NP_608698.2 proteasome_beta_type_2 1..193 CDD:239727 55/210 (26%)
PSMA8NP_653263.2 proteasome_alpha_type_7 5..219 CDD:239724 51/200 (26%)

Return to query results.
Submit another query.